Mr_Will,
It's not as simple as just increase duration and height.
Think about bore and stroke of each engine. Are they comparable? Is one a stroked version of the other? Think about what gas flow characteristics are getting the best scavenging. Need x-ray specs here. You should checkout the following site that says better scavenging can be had from smaller ports. How does that fit with higher lift/duration?
http://www.mototuneusa.com/break_in_secrets.htm



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