Hondata has announced that an automatic ecu off an 07-08 TSX can be used on 04-06 TSX's with a manual transmission. FlashPro Manager 1.7.2 allows a manual transmission calibration to be written onto an automatic transmission ecu.
You can pick up a used AT 07-08 ECU for $100 on car-part.com There seems to be alot more availbale . You can pick up Flashpro for $600 brand new if you look hard enough.
This could be a more worth while choice with more features compared to just getting an ecu reflash.
This announcement could mean cheaper prices for Littlebo's homebrew re-flash.
http://www.hondata.com/flashpro_tsx.html
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